Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 NMU-202ENST00000505262 693 ntTSL 3 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 AC097374.2-201ENST00000618617 1306 ntBASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ARHGEF28Q8N1W1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ARHGEF28Q8N1W1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
ARHGEF28Q8N1W1 KRT18P13-201ENST00000400056 1290 ntBASIC24.95■■□□□ 1.59
ARHGEF28Q8N1W1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.95■■□□□ 1.59
ARHGEF28Q8N1W1 GPALPP1-207ENST00000611650 899 ntBASIC24.95■■□□□ 1.59
ARHGEF28Q8N1W1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 AC073621.1-201ENST00000392730 636 ntBASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 ELK2BP-201ENST00000415014 1224 ntBASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 RNA5SP415-201ENST00000517246 115 ntBASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.95■■□□□ 1.58
ARHGEF28Q8N1W1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 BX005266.1-201ENST00000473402 457 ntBASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 AL096828.2-201ENST00000567259 1965 ntBASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ARHGEF28Q8N1W1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 HLA-J-201ENST00000462773 1622 ntBASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 AC104109.2-201ENST00000602919 1418 ntBASIC24.93■■□□□ 1.58
ARHGEF28Q8N1W1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 MED15P5-201ENST00000423150 992 ntBASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 COX10-202ENST00000429152 875 ntTSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AC100803.2-201ENST00000562459 1963 ntBASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AL356488.2-201ENST00000602755 427 ntBASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AC019129.2-201ENST00000609837 1235 ntBASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 AC139530.3-201ENST00000620344 690 ntBASIC24.92■■□□□ 1.58
ARHGEF28Q8N1W1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms