Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 GNAS-203ENST00000306120 1878 ntBASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF440Q8IYI8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 TERF1P1-201ENST00000311003 1181 ntBASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 AC024563.2-201ENST00000603282 481 ntBASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ZNF440Q8IYI8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 STARP1-201ENST00000397973 869 ntBASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 LINC01023-201ENST00000606054 436 ntBASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF440Q8IYI8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 AP000997.3-201ENST00000623333 2250 ntBASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 AC018470.1-201ENST00000624790 3129 ntBASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF440Q8IYI8 AL441883.1-201ENST00000566170 1045 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms