Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SCN4BQ8IWT1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN4BQ8IWT1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 TPM4P1-201ENST00000436100 807 ntBASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 AC068472.1-201ENST00000474589 881 ntBASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 UNC93B7-201ENST00000509439 705 ntBASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 AC091304.2-201ENST00000564639 760 ntBASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 AC111152.3-201ENST00000569699 673 ntBASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN4BQ8IWT1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC090340.1-201ENST00000620778 4980 ntBASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC246785.2-201ENST00000432512 513 ntBASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC009154.2-201ENST00000621177 724 ntBASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN4BQ8IWT1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 NUS1P2-201ENST00000417358 873 ntBASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TSPY19P-201ENST00000418461 509 ntBASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TSPY18P-201ENST00000441642 509 ntBASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 RN7SL510P-201ENST00000581311 263 ntBASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 IFNL4P1-201ENST00000607083 540 ntBASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN4BQ8IWT1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 MTCL1P1-201ENST00000446207 792 ntBASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms