Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
APLFQ8IW19 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18■□□□□ 0.47
APLFQ8IW19 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18■□□□□ 0.47
APLFQ8IW19 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.99■□□□□ 0.47
APLFQ8IW19 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.99■□□□□ 0.47
APLFQ8IW19 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.99■□□□□ 0.47
APLFQ8IW19 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.99■□□□□ 0.47
APLFQ8IW19 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
APLFQ8IW19 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.99■□□□□ 0.47
APLFQ8IW19 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.99■□□□□ 0.47
APLFQ8IW19 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.99■□□□□ 0.47
APLFQ8IW19 AL023803.3-201ENST00000615559 522 ntBASIC17.99■□□□□ 0.47
APLFQ8IW19 AL031432.5-201ENST00000641059 760 ntBASIC17.99■□□□□ 0.47
APLFQ8IW19 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.99■□□□□ 0.47
APLFQ8IW19 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
APLFQ8IW19 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
APLFQ8IW19 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
APLFQ8IW19 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APLFQ8IW19 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.99■□□□□ 0.47
APLFQ8IW19 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
APLFQ8IW19 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 KRT8P8-201ENST00000434750 1448 ntBASIC17.98■□□□□ 0.47
APLFQ8IW19 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.98■□□□□ 0.47
APLFQ8IW19 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
APLFQ8IW19 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.98■□□□□ 0.47
APLFQ8IW19 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.98■□□□□ 0.47
APLFQ8IW19 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.98■□□□□ 0.47
APLFQ8IW19 CA15P1-201ENST00000481698 905 ntBASIC17.98■□□□□ 0.47
APLFQ8IW19 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.98■□□□□ 0.47
APLFQ8IW19 AC141257.4-201ENST00000634557 245 ntBASIC17.98■□□□□ 0.47
APLFQ8IW19 AC136944.6-201ENST00000634818 245 ntBASIC17.98■□□□□ 0.47
APLFQ8IW19 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
APLFQ8IW19 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
APLFQ8IW19 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APLFQ8IW19 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
APLFQ8IW19 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.97■□□□□ 0.47
APLFQ8IW19 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 AC092647.4-201ENST00000457211 535 ntBASIC17.97■□□□□ 0.47
APLFQ8IW19 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.97■□□□□ 0.47
APLFQ8IW19 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
APLFQ8IW19 AL353719.1-201ENST00000566847 864 ntBASIC17.97■□□□□ 0.47
APLFQ8IW19 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.97■□□□□ 0.47
APLFQ8IW19 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.97■□□□□ 0.47
APLFQ8IW19 AC141586.3-201ENST00000562166 1838 ntBASIC17.97■□□□□ 0.47
APLFQ8IW19 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.97■□□□□ 0.47
APLFQ8IW19 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APLFQ8IW19 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
APLFQ8IW19 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APLFQ8IW19 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.96■□□□□ 0.47
APLFQ8IW19 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms