Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL3Q8IVW4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.58
CDKL3Q8IVW4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 AC087499.1-201ENST00000418141 1075 ntBASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 AC145285.6-201ENST00000604632 637 ntBASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 AC141257.4-201ENST00000634557 245 ntBASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 AC136944.6-201ENST00000634818 245 ntBASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDKL3Q8IVW4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
CDKL3Q8IVW4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 PVRIG2P-201ENST00000435460 978 ntBASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CDKL3Q8IVW4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms