Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 RCN1P2-201ENST00000398357 915 ntBASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 AC012640.2-201ENST00000561606 901 ntBASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 AC008687.5-201ENST00000593746 558 ntBASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 MTDHP3-201ENST00000594186 672 ntBASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC068472.1-201ENST00000474589 881 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 RPL13AP23-201ENST00000480739 586 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC011467.2-201ENST00000598425 242 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AL139288.1-201ENST00000623748 933 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC009533.2-201ENST00000543664 586 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC021087.4-201ENST00000563761 564 ntBASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI1Q7Z5J4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 LINC01126-201ENST00000623515 1646 ntBASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 MTCL1P1-201ENST00000446207 792 ntBASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 AC034105.1-201ENST00000563488 319 ntBASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 AC125634.1-201ENST00000438758 1403 ntBASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RAI1Q7Z5J4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms