Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 OR7E47P-204ENST00000575924 449 ntBASIC12.55□□□□□ -0.4
CSMD3Q7Z407 AC138761.1-201ENST00000584393 385 ntBASIC12.55□□□□□ -0.4
CSMD3Q7Z407 AC092364.2-202ENST00000597012 1073 ntBASIC12.55□□□□□ -0.4
CSMD3Q7Z407 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD3Q7Z407 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC007967.3-201ENST00000434308 558 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 MKNK2P1-201ENST00000437526 628 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 C20orf181-201ENST00000623918 480 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC112698.1-201ENST00000510299 916 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 MIR149-201ENST00000384879 89 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 AC097374.2-201ENST00000618617 1306 ntBASIC12.54□□□□□ -0.4
CSMD3Q7Z407 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CSMD3Q7Z407 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 AC108073.2-201ENST00000464002 357 ntBASIC12.53□□□□□ -0.4
CSMD3Q7Z407 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 AC010460.3-201ENST00000511359 1579 ntBASIC12.53□□□□□ -0.4
CSMD3Q7Z407 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 HCG4B-203ENST00000450128 991 ntBASIC12.53□□□□□ -0.4
CSMD3Q7Z407 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD3Q7Z407 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms