Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LYSMD3Q7Z3D4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LYSMD3Q7Z3D4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.21■□□□□ 0.5
LYSMD3Q7Z3D4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 AL358472.4-201ENST00000633140 710 ntBASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 NOC2LP1-202ENST00000452600 2235 ntBASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD3Q7Z3D4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 REXO1L9P-201ENST00000604264 2108 ntBASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.19■□□□□ 0.5
LYSMD3Q7Z3D4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 AL354751.1-201ENST00000412768 1863 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 ABALON-201ENST00000629058 1903 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 IGHGP-201ENST00000390555 1178 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 AC004263.2-201ENST00000617183 678 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 AP000550.4-202ENST00000639755 178 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 AC093010.1-201ENST00000473625 1624 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 LINC00602-201ENST00000629776 2065 ntBASIC18.18■□□□□ 0.5
LYSMD3Q7Z3D4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms