Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
OTOP1Q7RTM1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 UNC93B6-202ENST00000528242 690 ntBASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 AC112777.1-201ENST00000540175 1423 ntBASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 AP005117.1-201ENST00000584346 1413 ntBASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
OTOP1Q7RTM1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 AC008735.5-201ENST00000623544 497 ntBASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
OTOP1Q7RTM1 INTS4P1-201ENST00000438455 1935 ntBASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AC025062.2-201ENST00000605477 670 ntBASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 AL031598.1-201ENST00000561511 1773 ntBASIC20.9■□□□□ 0.94
OTOP1Q7RTM1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
OTOP1Q7RTM1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
OTOP1Q7RTM1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.89■□□□□ 0.94
OTOP1Q7RTM1 KRT8P50-201ENST00000562022 1438 ntBASIC20.89■□□□□ 0.94
OTOP1Q7RTM1 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 AL035633.1-201ENST00000406139 838 ntBASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 AC239800.4-201ENST00000603712 296 ntBASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
OTOP1Q7RTM1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms