Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 HBZP1-201ENST00000354915 429 ntBASIC17.01■□□□□ 0.31
RTL4Q6ZR62 PCED1CP-201ENST00000419887 785 ntBASIC17.01■□□□□ 0.31
RTL4Q6ZR62 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 AL354751.1-201ENST00000412768 1863 ntBASIC17.01■□□□□ 0.31
RTL4Q6ZR62 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 IER3-202ENST00000376377 1350 ntBASIC17.01■□□□□ 0.31
RTL4Q6ZR62 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.01■□□□□ 0.31
RTL4Q6ZR62 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
RTL4Q6ZR62 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 AP000593.1-201ENST00000393668 712 ntBASIC17■□□□□ 0.31
RTL4Q6ZR62 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17■□□□□ 0.31
RTL4Q6ZR62 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 AC092597.1-201ENST00000487352 616 ntBASIC17■□□□□ 0.31
RTL4Q6ZR62 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RTL4Q6ZR62 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17■□□□□ 0.31
RTL4Q6ZR62 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17■□□□□ 0.31
RTL4Q6ZR62 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 PCDHB18P-201ENST00000524813 2368 ntBASIC17■□□□□ 0.31
RTL4Q6ZR62 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RTL4Q6ZR62 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
RTL4Q6ZR62 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 AC005332.1-201ENST00000577698 1310 ntBASIC16.99■□□□□ 0.31
RTL4Q6ZR62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTL4Q6ZR62 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms