Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 AC067930.6-201ENST00000623257 4947 ntBASIC14.08□□□□□ -0.16
KCNIP4Q6PIL6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 HEIH-201ENST00000623091 1652 ntBASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 AC112777.1-201ENST00000540175 1423 ntBASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 AL499627.1-201ENST00000569373 2188 ntBASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KCNIP4Q6PIL6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 AL591742.1-201ENST00000604433 565 ntBASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.06□□□□□ -0.16
KCNIP4Q6PIL6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 TFP1-202ENST00000475455 1573 ntBASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP4Q6PIL6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms