Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM88Q6PEY1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 GPX1P1-201ENST00000388829 606 ntBASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 NCF1B-203ENST00000435988 1254 ntBASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 AL109923.1-201ENST00000618799 583 ntBASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TMEM88Q6PEY1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AC104771.1-201ENST00000603335 964 ntBASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AL121832.2-201ENST00000610979 668 ntBASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AL050303.2-201ENST00000619798 666 ntBASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AC083906.6-201ENST00000641366 219 ntBASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM88Q6PEY1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 AGGF1P2-201ENST00000426656 2106 ntBASIC14.65□□□□□ -0.06
TMEM88Q6PEY1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms