Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 UNC93B2-201ENST00000285383 730 ntBASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 MESTP1-201ENST00000404287 994 ntBASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 AC097488.1-201ENST00000507834 756 ntBASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 AC008764.6-201ENST00000595909 2069 ntBASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM53Q6P2H8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 IRX1P1-201ENST00000438849 1838 ntBASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AC008040.2-201ENST00000461049 708 ntBASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM53Q6P2H8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 CKBP1-201ENST00000565489 1086 ntBASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM53Q6P2H8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms