Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 AC025678.2-201ENST00000562061 970 ntBASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 AC006504.4-201ENST00000592118 1568 ntBASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTCRAQ6ISU1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 FAM58CP-201ENST00000435741 640 ntBASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 AC004790.2-201ENST00000623588 572 ntBASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 AC141586.3-201ENST00000562166 1838 ntBASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCRAQ6ISU1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 GK-202ENST00000378941 458 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 SPDYE21P-201ENST00000413323 827 ntBASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 AC015922.1-201ENST00000421102 1152 ntBASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 AC004877.2-201ENST00000623941 599 ntBASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCRAQ6ISU1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 IGHV3-65-201ENST00000523210 341 ntBASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms