Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 HOMER2P1-201ENST00000455653 964 ntBASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 KRT89P-201ENST00000620027 1478 ntBASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.56■■□□□ 1.04
CREB3L3Q68CJ9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 AC026471.1-201ENST00000564629 3026 ntBASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 AC100803.2-201ENST00000562459 1963 ntBASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CREB3L3Q68CJ9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 AC012317.2-201ENST00000623305 2251 ntBASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 HBZP1-201ENST00000354915 429 ntBASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CREB3L3Q68CJ9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 AC006116.8-202ENST00000587620 1550 ntBASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 AC112907.2-201ENST00000448639 330 ntBASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 AC063952.2-201ENST00000498792 1227 ntBASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
CREB3L3Q68CJ9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.52■■□□□ 1.04
CREB3L3Q68CJ9 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms