Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 AP001059.3-201ENST00000619053 235 ntBASIC17.48■□□□□ 0.39
RIF1Q5UIP0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 KRT8P47-201ENST00000604727 1398 ntBASIC17.48■□□□□ 0.39
RIF1Q5UIP0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RIF1Q5UIP0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 RN7SL692P-201ENST00000464677 288 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 BCAR1-209ENST00000546196 1340 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 AL662799.1-202ENST00000614205 422 ntBASIC17.47■□□□□ 0.39
RIF1Q5UIP0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RIF1Q5UIP0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 BASP1P1-201ENST00000430708 665 ntBASIC17.46■□□□□ 0.39
RIF1Q5UIP0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.46■□□□□ 0.39
RIF1Q5UIP0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 SPDYE22P-201ENST00000582158 798 ntBASIC17.46■□□□□ 0.39
RIF1Q5UIP0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 AC068137.2-201ENST00000605408 478 ntBASIC17.46■□□□□ 0.39
RIF1Q5UIP0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RIF1Q5UIP0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.46■□□□□ 0.38
RIF1Q5UIP0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.46■□□□□ 0.38
RIF1Q5UIP0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RIF1Q5UIP0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 CNN2P2-201ENST00000443536 909 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 CNN2P3-201ENST00000450201 906 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC069335.1-201ENST00000489972 472 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AL512356.2-201ENST00000546955 174 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AL136317.3-201ENST00000618497 906 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC008687.5-201ENST00000593746 558 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC084346.2-201ENST00000607097 949 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC009093.7-201ENST00000623853 1223 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms