Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 AC128688.1-201ENST00000487626 519 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 AC010653.2-201ENST00000623505 997 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 KRT8P32-201ENST00000512863 1461 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 AL499627.1-201ENST00000569373 2188 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 NFIC-211ENST00000641145 8399 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 KRT8P9-201ENST00000558927 1449 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 AC092338.2-201ENST00000568827 1415 ntBASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 AC087499.1-201ENST00000418141 1075 ntBASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 AC138028.4-201ENST00000564984 1845 ntBASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
ATPAF1Q5TC12 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 AL645608.8-201ENST00000606034 2086 ntBASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ATPAF1Q5TC12 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.73■□□□□ 0.11
ATPAF1Q5TC12 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms