Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SGO1Q5FBB7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.64■□□□□ 0.42
SGO1Q5FBB7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SGO1Q5FBB7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SGO1Q5FBB7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.64■□□□□ 0.42
SGO1Q5FBB7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 ECEL1P2-202ENST00000465689 757 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 AC128688.1-201ENST00000487626 519 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 AC010653.2-201ENST00000623505 997 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 AC134043.2-201ENST00000624206 2238 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 AP000997.3-201ENST00000623333 2250 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SGO1Q5FBB7 KRT8P7-201ENST00000533003 1432 ntBASIC17.64■□□□□ 0.41
SGO1Q5FBB7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 AC093827.2-201ENST00000512654 315 ntBASIC17.63■□□□□ 0.41
SGO1Q5FBB7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 AC024243.1-201ENST00000609234 778 ntBASIC17.63■□□□□ 0.41
SGO1Q5FBB7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SGO1Q5FBB7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 LINC01126-201ENST00000623515 1646 ntBASIC17.62■□□□□ 0.41
SGO1Q5FBB7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 AL596275.1-201ENST00000423464 877 ntBASIC17.62■□□□□ 0.41
SGO1Q5FBB7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.62■□□□□ 0.41
SGO1Q5FBB7 AC009947.2-201ENST00000444014 672 ntBASIC17.62■□□□□ 0.41
SGO1Q5FBB7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 AC104390.1-201ENST00000555663 520 ntBASIC17.62■□□□□ 0.41
SGO1Q5FBB7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SGO1Q5FBB7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms