Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 REXO1L12P-201ENST00000622156 912 ntBASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 CR769767.2-201ENST00000622735 460 ntBASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 DUTP2-201ENST00000519164 463 ntBASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 AL023803.3-201ENST00000615559 522 ntBASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 PCDHA12-202ENST00000613593 2588 ntBASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 HTR7P1-202ENST00000624664 4411 ntBASIC17.12■□□□□ 0.33
RUNDC3AQ59EK9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AP003041.3-201ENST00000527151 707 ntBASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AC104390.1-201ENST00000555663 520 ntBASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AC009065.1-201ENST00000564055 1225 ntBASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RUNDC3AQ59EK9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 RPS2P55-201ENST00000397318 883 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AC107956.1-201ENST00000494359 873 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms