Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.62■□□□□ 0.57
ALFQ53S48 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ALFQ53S48 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
ALFQ53S48 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALFQ53S48 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ALFQ53S48 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 ATP5G2P1-201ENST00000433580 426 ntBASIC18.61■□□□□ 0.57
ALFQ53S48 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.61■□□□□ 0.57
ALFQ53S48 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.61■□□□□ 0.57
ALFQ53S48 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
ALFQ53S48 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
ALFQ53S48 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALFQ53S48 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
ALFQ53S48 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.61■□□□□ 0.57
ALFQ53S48 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALFQ53S48 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ALFQ53S48 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.6■□□□□ 0.57
ALFQ53S48 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.6■□□□□ 0.57
ALFQ53S48 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.6■□□□□ 0.57
ALFQ53S48 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 RN7SL606P-201ENST00000472779 293 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.6■□□□□ 0.57
ALFQ53S48 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.6■□□□□ 0.57
ALFQ53S48 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ALFQ53S48 AP002414.4-201ENST00000589764 1148 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 REXO1L9P-201ENST00000604264 2108 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.6■□□□□ 0.57
ALFQ53S48 AL592071.1-201ENST00000611956 408 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 AC092119.3-201ENST00000612618 583 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 IGHV3-41-201ENST00000613121 348 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.6■□□□□ 0.57
ALFQ53S48 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.6■□□□□ 0.57
ALFQ53S48 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALFQ53S48 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 TSPY12P-201ENST00000421279 868 ntBASIC18.59■□□□□ 0.57
ALFQ53S48 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.59■□□□□ 0.57
ALFQ53S48 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.59■□□□□ 0.57
ALFQ53S48 AC090616.6-201ENST00000582640 721 ntBASIC18.59■□□□□ 0.57
ALFQ53S48 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.59■□□□□ 0.57
ALFQ53S48 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ALFQ53S48 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALFQ53S48 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ALFQ53S48 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.59■□□□□ 0.57
ALFQ53S48 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
ALFQ53S48 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.58■□□□□ 0.57
ALFQ53S48 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ALFQ53S48 AC020763.4-201ENST00000623414 4170 ntBASIC18.58■□□□□ 0.57
ALFQ53S48 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms