Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 AC011270.2-201ENST00000624293 2550 ntBASIC17.93■□□□□ 0.46
CCDC153Q494R4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 DUTP2-201ENST00000519164 463 ntBASIC17.93■□□□□ 0.46
CCDC153Q494R4 CD99P1-205ENST00000527459 561 ntBASIC17.93■□□□□ 0.46
CCDC153Q494R4 WWOX-216ENST00000569818 525 ntBASIC17.93■□□□□ 0.46
CCDC153Q494R4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC153Q494R4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC153Q494R4 AL024508.2-201ENST00000607749 1894 ntBASIC17.92■□□□□ 0.46
CCDC153Q494R4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC153Q494R4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC153Q494R4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 AC009053.2-201ENST00000563701 2365 ntBASIC17.91■□□□□ 0.46
CCDC153Q494R4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC153Q494R4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 AC104390.1-201ENST00000555663 520 ntBASIC17.91■□□□□ 0.46
CCDC153Q494R4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC153Q494R4 AP005242.2-201ENST00000580065 1175 ntBASIC17.91■□□□□ 0.46
CCDC153Q494R4 MIR4651-201ENST00000582622 73 ntBASIC17.91■□□□□ 0.46
CCDC153Q494R4 AP001412.1-201ENST00000608405 714 ntBASIC17.91■□□□□ 0.46
CCDC153Q494R4 CR769767.2-201ENST00000622735 460 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms