Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC004877.2-201ENST00000623941 599 ntBASIC31.67■■■□□ 2.66
HMGXB3Q12766 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC31.67■■■□□ 2.66
HMGXB3Q12766 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
HMGXB3Q12766 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC31.66■■■□□ 2.66
HMGXB3Q12766 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
HMGXB3Q12766 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 RBM7-207ENST00000544582 692 ntTSL 3 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AQP6-205ENST00000618286 829 ntTSL 5 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.65■■■□□ 2.66
HMGXB3Q12766 TBC1D3P5-201ENST00000579401 1545 ntBASIC31.64■■■□□ 2.66
HMGXB3Q12766 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HMGXB3Q12766 AC132938.5-201ENST00000624980 1813 ntBASIC31.64■■■□□ 2.66
HMGXB3Q12766 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HMGXB3Q12766 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
HMGXB3Q12766 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HMGXB3Q12766 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
HMGXB3Q12766 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
HMGXB3Q12766 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC31.64■■■□□ 2.66
HMGXB3Q12766 AC004835.2-201ENST00000603762 682 ntBASIC31.64■■■□□ 2.66
HMGXB3Q12766 AC068137.2-201ENST00000605408 478 ntBASIC31.64■■■□□ 2.66
HMGXB3Q12766 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 AC103564.2-201ENST00000432853 1299 ntBASIC31.63■■■□□ 2.65
HMGXB3Q12766 S100A2-206ENST00000497140 697 ntTSL 2 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 SMN2-210ENST00000511812 867 ntTSL 2 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC31.63■■■□□ 2.65
HMGXB3Q12766 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
HMGXB3Q12766 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HMGXB3Q12766 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
HMGXB3Q12766 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
HMGXB3Q12766 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
HMGXB3Q12766 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC31.62■■■□□ 2.65
HMGXB3Q12766 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
HMGXB3Q12766 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC31.62■■■□□ 2.65
HMGXB3Q12766 BCAR1-209ENST00000546196 1340 ntBASIC31.62■■■□□ 2.65
HMGXB3Q12766 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
HMGXB3Q12766 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 TAF8-206ENST00000472818 719 ntTSL 2 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 AQP6-203ENST00000551733 849 ntTSL 3 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 MIR4745-201ENST00000577608 62 ntBASIC31.61■■■□□ 2.65
HMGXB3Q12766 INO80C-206ENST00000586489 594 ntTSL 3 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 AC105339.1-204ENST00000636249 355 ntBASIC31.61■■■□□ 2.65
HMGXB3Q12766 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HMGXB3Q12766 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
HMGXB3Q12766 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC31.61■■■□□ 2.65
HMGXB3Q12766 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
HMGXB3Q12766 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC31.6■■■□□ 2.65
HMGXB3Q12766 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC31.6■■■□□ 2.65
HMGXB3Q12766 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HMGXB3Q12766 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HMGXB3Q12766 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC31.6■■■□□ 2.65
HMGXB3Q12766 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC31.6■■■□□ 2.65
HMGXB3Q12766 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 AC092474.2-201ENST00000424288 719 ntBASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms