Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD47Q08722 AL135905.2-201ENST00000584934 1404 ntBASIC16.87■□□□□ 0.29
CD47Q08722 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 MYLKP1-201ENST00000509077 1580 ntBASIC16.86■□□□□ 0.29
CD47Q08722 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CD47Q08722 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.86■□□□□ 0.29
CD47Q08722 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 AC026271.3-201ENST00000571884 352 ntBASIC16.86■□□□□ 0.29
CD47Q08722 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD47Q08722 AC011298.2-201ENST00000617989 482 ntBASIC16.86■□□□□ 0.29
CD47Q08722 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CD47Q08722 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.86■□□□□ 0.29
CD47Q08722 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD47Q08722 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD47Q08722 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD47Q08722 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CD47Q08722 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.85■□□□□ 0.29
CD47Q08722 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.85■□□□□ 0.29
CD47Q08722 AC098590.1-201ENST00000468126 897 ntBASIC16.85■□□□□ 0.29
CD47Q08722 AC091390.4-202ENST00000476426 537 ntBASIC16.85■□□□□ 0.29
CD47Q08722 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 PRSS44-201ENST00000515154 1146 ntBASIC16.85■□□□□ 0.29
CD47Q08722 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.85■□□□□ 0.29
CD47Q08722 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.85■□□□□ 0.29
CD47Q08722 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CD47Q08722 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.85■□□□□ 0.29
CD47Q08722 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD47Q08722 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.85■□□□□ 0.29
CD47Q08722 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.84■□□□□ 0.29
CD47Q08722 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CD47Q08722 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CD47Q08722 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD47Q08722 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD47Q08722 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
CD47Q08722 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD47Q08722 LINC00602-201ENST00000629776 2065 ntBASIC16.84■□□□□ 0.29
CD47Q08722 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD47Q08722 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
CD47Q08722 AL118508.1-201ENST00000613502 2345 ntBASIC16.84■□□□□ 0.29
CD47Q08722 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD47Q08722 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.84■□□□□ 0.29
CD47Q08722 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.84■□□□□ 0.29
CD47Q08722 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.84■□□□□ 0.29
CD47Q08722 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms