Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ERCC6Q03468 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ERCC6Q03468 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ERCC6Q03468 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ERCC6Q03468 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ERCC6Q03468 TREML5P-201ENST00000421694 576 ntBASIC30.71■■■□□ 2.51
ERCC6Q03468 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC30.71■■■□□ 2.51
ERCC6Q03468 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC30.71■■■□□ 2.51
ERCC6Q03468 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC30.71■■■□□ 2.51
ERCC6Q03468 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.71■■■□□ 2.51
ERCC6Q03468 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC30.7■■■□□ 2.51
ERCC6Q03468 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ERCC6Q03468 SLC25A6P5-201ENST00000435663 894 ntBASIC30.7■■■□□ 2.51
ERCC6Q03468 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC30.7■■■□□ 2.51
ERCC6Q03468 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
ERCC6Q03468 COQ9-214ENST00000567933 882 ntTSL 3 BASIC30.7■■■□□ 2.51
ERCC6Q03468 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC30.7■■■□□ 2.51
ERCC6Q03468 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ERCC6Q03468 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC30.7■■■□□ 2.51
ERCC6Q03468 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC30.7■■■□□ 2.51
ERCC6Q03468 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ERCC6Q03468 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
ERCC6Q03468 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
ERCC6Q03468 SDHAP2-201ENST00000455183 2001 ntBASIC30.7■■■□□ 2.5
ERCC6Q03468 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ERCC6Q03468 AL512356.2-201ENST00000546955 174 ntBASIC30.7■■■□□ 2.5
ERCC6Q03468 AL662799.1-202ENST00000614205 422 ntBASIC30.7■■■□□ 2.5
ERCC6Q03468 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC30.7■■■□□ 2.5
ERCC6Q03468 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ERCC6Q03468 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC30.69■■■□□ 2.5
ERCC6Q03468 AC099343.3-201ENST00000605834 2503 ntBASIC30.69■■■□□ 2.5
ERCC6Q03468 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ERCC6Q03468 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
ERCC6Q03468 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC30.69■■■□□ 2.5
ERCC6Q03468 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC30.69■■■□□ 2.5
ERCC6Q03468 BAD-207ENST00000544785 525 ntTSL 3 BASIC30.69■■■□□ 2.5
ERCC6Q03468 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC30.69■■■□□ 2.5
ERCC6Q03468 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC30.69■■■□□ 2.5
ERCC6Q03468 AP001059.3-201ENST00000619053 235 ntBASIC30.69■■■□□ 2.5
ERCC6Q03468 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ERCC6Q03468 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.68■■■□□ 2.5
ERCC6Q03468 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC30.68■■■□□ 2.5
ERCC6Q03468 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
ERCC6Q03468 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ERCC6Q03468 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ERCC6Q03468 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC30.68■■■□□ 2.5
ERCC6Q03468 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC30.68■■■□□ 2.5
ERCC6Q03468 GATB-205ENST00000508611 605 ntTSL 2 BASIC30.68■■■□□ 2.5
ERCC6Q03468 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
ERCC6Q03468 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ERCC6Q03468 NFYC-AS1-201ENST00000606277 1687 ntBASIC30.68■■■□□ 2.5
ERCC6Q03468 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC30.67■■■□□ 2.5
ERCC6Q03468 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
ERCC6Q03468 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC30.67■■■□□ 2.5
ERCC6Q03468 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ERCC6Q03468 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC30.67■■■□□ 2.5
ERCC6Q03468 KRT18P32-201ENST00000424695 1287 ntBASIC30.67■■■□□ 2.5
ERCC6Q03468 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC30.67■■■□□ 2.5
ERCC6Q03468 GPR53P-205ENST00000457298 1084 ntBASIC30.67■■■□□ 2.5
ERCC6Q03468 IGHV3-42-201ENST00000520410 361 ntBASIC30.67■■■□□ 2.5
ERCC6Q03468 AC112191.1-201ENST00000523689 701 ntBASIC30.67■■■□□ 2.5
ERCC6Q03468 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC30.67■■■□□ 2.5
ERCC6Q03468 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC30.67■■■□□ 2.5
ERCC6Q03468 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC30.67■■■□□ 2.5
ERCC6Q03468 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC30.66■■■□□ 2.5
ERCC6Q03468 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC30.66■■■□□ 2.5
ERCC6Q03468 AC069335.1-201ENST00000489972 472 ntBASIC30.66■■■□□ 2.5
ERCC6Q03468 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
ERCC6Q03468 AC140878.1-201ENST00000565277 250 ntBASIC30.66■■■□□ 2.5
ERCC6Q03468 IFT20-216ENST00000588477 774 ntTSL 5 BASIC30.66■■■□□ 2.5
ERCC6Q03468 AC116407.2-201ENST00000613639 860 ntBASIC30.66■■■□□ 2.5
ERCC6Q03468 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ERCC6Q03468 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC30.66■■■□□ 2.5
ERCC6Q03468 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
ERCC6Q03468 AC010460.3-201ENST00000511359 1579 ntBASIC30.66■■■□□ 2.5
ERCC6Q03468 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ERCC6Q03468 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ERCC6Q03468 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
ERCC6Q03468 SERBP1P5-201ENST00000510079 1181 ntBASIC30.65■■■□□ 2.5
ERCC6Q03468 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC30.65■■■□□ 2.5
ERCC6Q03468 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ERCC6Q03468 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC30.65■■■□□ 2.5
ERCC6Q03468 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
ERCC6Q03468 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
ERCC6Q03468 AC026310.3-201ENST00000625186 2373 ntBASIC30.65■■■□□ 2.5
ERCC6Q03468 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ERCC6Q03468 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms