Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 FAM220CP-201ENST00000395253 831 ntBASIC19.7■□□□□ 0.74
CDC42EP1Q00587 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 AL355877.3-201ENST00000622820 899 ntBASIC19.7■□□□□ 0.74
CDC42EP1Q00587 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDC42EP1Q00587 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 SCARNA2-201ENST00000458748 420 ntBASIC19.69■□□□□ 0.74
CDC42EP1Q00587 AC009078.2-202ENST00000463353 338 ntBASIC19.69■□□□□ 0.74
CDC42EP1Q00587 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDC42EP1Q00587 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 ABCD1P5-201ENST00000445663 754 ntBASIC19.68■□□□□ 0.74
CDC42EP1Q00587 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 AC008608.2-201ENST00000606089 416 ntBASIC19.68■□□□□ 0.74
CDC42EP1Q00587 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42EP1Q00587 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 SLC25A6P4-201ENST00000586535 553 ntBASIC19.67■□□□□ 0.74
CDC42EP1Q00587 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CDC42EP1Q00587 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms