Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.98■□□□□ 0.15
NKX6-1P78426 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 AL022342.1-201ENST00000400363 863 ntBASIC15.98■□□□□ 0.15
NKX6-1P78426 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 AP002383.4-201ENST00000442518 975 ntBASIC15.98■□□□□ 0.15
NKX6-1P78426 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.98■□□□□ 0.15
NKX6-1P78426 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 KRT8P26-201ENST00000534154 1276 ntBASIC15.98■□□□□ 0.15
NKX6-1P78426 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NKX6-1P78426 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NKX6-1P78426 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 AC006538.3-201ENST00000612495 578 ntBASIC15.98■□□□□ 0.15
NKX6-1P78426 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-1P78426 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-1P78426 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-1P78426 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-1P78426 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-1P78426 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX6-1P78426 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX6-1P78426 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NKX6-1P78426 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NKX6-1P78426 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 EMBP1-201ENST00000458200 901 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.97■□□□□ 0.15
NKX6-1P78426 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-1P78426 MIR3180-4-201ENST00000582223 153 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.97■□□□□ 0.15
NKX6-1P78426 AC010240.3-201ENST00000607688 395 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 AC023511.2-201ENST00000618803 211 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.97■□□□□ 0.15
NKX6-1P78426 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-1P78426 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX6-1P78426 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 KRT18P1-202ENST00000452408 1331 ntBASIC15.96■□□□□ 0.15
NKX6-1P78426 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NKX6-1P78426 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms