Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.86■□□□□ 0.61
IRX4P78413 PCDHB18P-201ENST00000524813 2368 ntBASIC18.86■□□□□ 0.61
IRX4P78413 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX4P78413 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX4P78413 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 HBZP1-201ENST00000354915 429 ntBASIC18.86■□□□□ 0.61
IRX4P78413 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX4P78413 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX4P78413 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX4P78413 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX4P78413 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX4P78413 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX4P78413 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX4P78413 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.85■□□□□ 0.61
IRX4P78413 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 KRT8P11-201ENST00000409686 1436 ntBASIC18.85■□□□□ 0.61
IRX4P78413 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
IRX4P78413 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 AC004870.1-201ENST00000315132 882 ntBASIC18.85■□□□□ 0.61
IRX4P78413 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.85■□□□□ 0.61
IRX4P78413 AL645929.1-201ENST00000420084 975 ntBASIC18.85■□□□□ 0.61
IRX4P78413 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.85■□□□□ 0.61
IRX4P78413 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.85■□□□□ 0.61
IRX4P78413 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.85■□□□□ 0.61
IRX4P78413 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.85■□□□□ 0.61
IRX4P78413 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX4P78413 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX4P78413 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX4P78413 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
IRX4P78413 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
IRX4P78413 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX4P78413 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX4P78413 UNC93B7-201ENST00000509439 705 ntBASIC18.84■□□□□ 0.61
IRX4P78413 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX4P78413 AC111152.3-201ENST00000569699 673 ntBASIC18.84■□□□□ 0.61
IRX4P78413 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms