Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PRAMEP78395 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEP78395 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEP78395 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEP78395 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.3■□□□□ 0.52
PRAMEP78395 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEP78395 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEP78395 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEP78395 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEP78395 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEP78395 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 AC138028.4-201ENST00000564984 1845 ntBASIC18.29■□□□□ 0.52
PRAMEP78395 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.29■□□□□ 0.52
PRAMEP78395 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PRAMEP78395 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEP78395 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.29■□□□□ 0.52
PRAMEP78395 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEP78395 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEP78395 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEP78395 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEP78395 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEP78395 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRAMEP78395 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PRAMEP78395 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEP78395 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PRAMEP78395 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEP78395 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEP78395 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEP78395 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEP78395 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEP78395 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 MIR3917-201ENST00000580971 93 ntBASIC18.28■□□□□ 0.52
PRAMEP78395 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 AL138966.2-201ENST00000621997 464 ntBASIC18.28■□□□□ 0.52
PRAMEP78395 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PRAMEP78395 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PRAMEP78395 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEP78395 AP000997.3-201ENST00000623333 2250 ntBASIC18.27■□□□□ 0.52
PRAMEP78395 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEP78395 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms