Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM4P67936 AC133681.1-201ENST00000465482 601 ntBASIC20.34■□□□□ 0.85
TPM4P67936 AC124016.1-201ENST00000609552 612 ntBASIC20.34■□□□□ 0.85
TPM4P67936 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.34■□□□□ 0.85
TPM4P67936 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.34■□□□□ 0.85
TPM4P67936 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM4P67936 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 KRT8P50-201ENST00000562022 1438 ntBASIC20.34■□□□□ 0.85
TPM4P67936 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TPM4P67936 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TPM4P67936 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM4P67936 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.33■□□□□ 0.85
TPM4P67936 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TPM4P67936 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.33■□□□□ 0.85
TPM4P67936 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.33■□□□□ 0.85
TPM4P67936 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM4P67936 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TPM4P67936 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.33■□□□□ 0.85
TPM4P67936 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM4P67936 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM4P67936 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM4P67936 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM4P67936 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.33■□□□□ 0.84
TPM4P67936 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TPM4P67936 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM4P67936 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM4P67936 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TPM4P67936 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 RNA5SP413-201ENST00000516373 109 ntBASIC20.32■□□□□ 0.84
TPM4P67936 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.32■□□□□ 0.84
TPM4P67936 AC104771.1-201ENST00000603335 964 ntBASIC20.32■□□□□ 0.84
TPM4P67936 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM4P67936 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM4P67936 KRT18P55-202ENST00000578578 1546 ntBASIC20.32■□□□□ 0.84
TPM4P67936 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TPM4P67936 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TPM4P67936 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 AC009102.3-201ENST00000623118 1491 ntBASIC20.31■□□□□ 0.84
TPM4P67936 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM4P67936 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 AL023284.2-201ENST00000405850 579 ntBASIC20.31■□□□□ 0.84
TPM4P67936 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TPM4P67936 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TPM4P67936 CR392000.1-201ENST00000624770 1228 ntBASIC20.31■□□□□ 0.84
TPM4P67936 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TPM4P67936 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM4P67936 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 AC009053.2-201ENST00000563701 2365 ntBASIC20.31■□□□□ 0.84
TPM4P67936 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM4P67936 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TPM4P67936 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM4P67936 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM4P67936 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TPM4P67936 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TPM4P67936 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TPM4P67936 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM4P67936 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
TPM4P67936 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TPM4P67936 MIR149-201ENST00000384879 89 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms