Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP46P62068 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
USP46P62068 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.03■□□□□ 0.64
USP46P62068 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP46P62068 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.03■□□□□ 0.64
USP46P62068 TSPY19P-201ENST00000418461 509 ntBASIC19.03■□□□□ 0.64
USP46P62068 TSPY12P-201ENST00000421279 868 ntBASIC19.03■□□□□ 0.64
USP46P62068 TSPY18P-201ENST00000441642 509 ntBASIC19.03■□□□□ 0.64
USP46P62068 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.03■□□□□ 0.64
USP46P62068 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 Z69720.1-201ENST00000601483 472 ntBASIC19.03■□□□□ 0.64
USP46P62068 AL353801.3-201ENST00000609898 542 ntBASIC19.03■□□□□ 0.64
USP46P62068 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
USP46P62068 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 WIZP1-201ENST00000531444 2299 ntBASIC19.03■□□□□ 0.64
USP46P62068 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP46P62068 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.03■□□□□ 0.64
USP46P62068 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
USP46P62068 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
USP46P62068 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
USP46P62068 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 GMCL1P1-201ENST00000463439 1581 ntBASIC19.02■□□□□ 0.64
USP46P62068 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
USP46P62068 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.02■□□□□ 0.64
USP46P62068 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.02■□□□□ 0.64
USP46P62068 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 AC138894.3-201ENST00000603787 634 ntBASIC19.02■□□□□ 0.64
USP46P62068 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.02■□□□□ 0.64
USP46P62068 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.02■□□□□ 0.64
USP46P62068 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.02■□□□□ 0.64
USP46P62068 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP46P62068 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP46P62068 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP46P62068 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP46P62068 AC073592.3-201ENST00000625118 1834 ntBASIC19.02■□□□□ 0.63
USP46P62068 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP46P62068 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP46P62068 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.02■□□□□ 0.63
USP46P62068 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.02■□□□□ 0.63
USP46P62068 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 NSUN5P1-202ENST00000421140 1535 ntBASIC19.01■□□□□ 0.63
USP46P62068 NSUN5P2-203ENST00000457352 1529 ntBASIC19.01■□□□□ 0.63
USP46P62068 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.01■□□□□ 0.63
USP46P62068 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
USP46P62068 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.01■□□□□ 0.63
USP46P62068 AC068472.1-201ENST00000474589 881 ntBASIC19.01■□□□□ 0.63
USP46P62068 AC011840.4-201ENST00000578471 627 ntBASIC19.01■□□□□ 0.63
USP46P62068 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.01■□□□□ 0.63
USP46P62068 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP46P62068 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 AC099336.1-202ENST00000602961 463 ntBASIC19.01■□□□□ 0.63
USP46P62068 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
USP46P62068 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP46P62068 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
USP46P62068 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
USP46P62068 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP46P62068 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP46P62068 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
USP46P62068 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19■□□□□ 0.63
USP46P62068 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP46P62068 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
USP46P62068 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 AIRN-201ENST00000601203 4374 ntBASIC19■□□□□ 0.63
USP46P62068 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19■□□□□ 0.63
USP46P62068 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19■□□□□ 0.63
USP46P62068 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms