Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4CP60510 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP4CP60510 MTDHP3-201ENST00000594186 672 ntBASIC21.39■■□□□ 1.01
PPP4CP60510 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
PPP4CP60510 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4CP60510 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PPP4CP60510 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4CP60510 AL096828.2-201ENST00000567259 1965 ntBASIC21.39■■□□□ 1.01
PPP4CP60510 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4CP60510 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PPP4CP60510 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4CP60510 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP4CP60510 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4CP60510 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4CP60510 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PPP4CP60510 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4CP60510 AC022898.2-201ENST00000616822 1312 ntBASIC21.38■■□□□ 1.01
PPP4CP60510 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 FAM220CP-201ENST00000395253 831 ntBASIC21.38■■□□□ 1.01
PPP4CP60510 KRT18P67-201ENST00000432816 1264 ntBASIC21.38■■□□□ 1.01
PPP4CP60510 AP000347.1-202ENST00000435868 847 ntBASIC21.38■■□□□ 1.01
PPP4CP60510 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4CP60510 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PPP4CP60510 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4CP60510 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4CP60510 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4CP60510 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4CP60510 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PPP4CP60510 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4CP60510 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP4CP60510 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.36■■□□□ 1.01
PPP4CP60510 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 AC018712.1-201ENST00000455767 687 ntBASIC21.36■■□□□ 1.01
PPP4CP60510 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.36■■□□□ 1.01
PPP4CP60510 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.36■■□□□ 1.01
PPP4CP60510 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.36■■□□□ 1.01
PPP4CP60510 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PPP4CP60510 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4CP60510 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4CP60510 AC010460.3-201ENST00000511359 1579 ntBASIC21.36■■□□□ 1.01
PPP4CP60510 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.35■■□□□ 1.01
PPP4CP60510 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PPP4CP60510 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4CP60510 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms