Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
VSX2P58304 AC092119.3-201ENST00000612618 583 ntBASIC17.34■□□□□ 0.37
VSX2P58304 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.34■□□□□ 0.37
VSX2P58304 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VSX2P58304 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.33■□□□□ 0.37
VSX2P58304 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VSX2P58304 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
VSX2P58304 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.33■□□□□ 0.37
VSX2P58304 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
VSX2P58304 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VSX2P58304 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.33■□□□□ 0.36
VSX2P58304 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.33■□□□□ 0.36
VSX2P58304 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
VSX2P58304 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 ATP5G2P1-201ENST00000433580 426 ntBASIC17.33■□□□□ 0.36
VSX2P58304 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 AC113404.2-201ENST00000507884 177 ntBASIC17.33■□□□□ 0.36
VSX2P58304 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
VSX2P58304 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.33■□□□□ 0.36
VSX2P58304 NPAP1P7-201ENST00000613027 823 ntBASIC17.33■□□□□ 0.36
VSX2P58304 IGHV3-41-201ENST00000613121 348 ntBASIC17.33■□□□□ 0.36
VSX2P58304 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.33■□□□□ 0.36
VSX2P58304 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VSX2P58304 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VSX2P58304 LINC00602-201ENST00000629776 2065 ntBASIC17.33■□□□□ 0.36
VSX2P58304 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.33■□□□□ 0.36
VSX2P58304 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VSX2P58304 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VSX2P58304 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VSX2P58304 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
VSX2P58304 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 AC104581.1-202ENST00000635932 2618 ntBASIC17.32■□□□□ 0.36
VSX2P58304 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
VSX2P58304 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.32■□□□□ 0.36
VSX2P58304 AP002383.4-201ENST00000442518 975 ntBASIC17.32■□□□□ 0.36
VSX2P58304 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.32■□□□□ 0.36
VSX2P58304 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.32■□□□□ 0.36
VSX2P58304 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.32■□□□□ 0.36
VSX2P58304 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.32■□□□□ 0.36
VSX2P58304 GUSBP12-201ENST00000513727 720 ntBASIC17.32■□□□□ 0.36
VSX2P58304 AC090616.6-201ENST00000582640 721 ntBASIC17.32■□□□□ 0.36
VSX2P58304 AP002414.4-201ENST00000589764 1148 ntBASIC17.32■□□□□ 0.36
VSX2P58304 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
VSX2P58304 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VSX2P58304 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
VSX2P58304 AC005332.8-201ENST00000622750 2735 ntBASIC17.32■□□□□ 0.36
VSX2P58304 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VSX2P58304 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.31■□□□□ 0.36
VSX2P58304 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VSX2P58304 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
VSX2P58304 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSX2P58304 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms