Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.87■□□□□ 0.13
FOXG1P55316 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 LINC00265-3P-201ENST00000447588 903 ntBASIC15.87■□□□□ 0.13
FOXG1P55316 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 TOB2P1-201ENST00000469761 992 ntBASIC15.87■□□□□ 0.13
FOXG1P55316 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 AC068472.1-201ENST00000474589 881 ntBASIC15.87■□□□□ 0.13
FOXG1P55316 KRT18P56-201ENST00000507275 550 ntBASIC15.87■□□□□ 0.13
FOXG1P55316 GUSBP12-201ENST00000513727 720 ntBASIC15.87■□□□□ 0.13
FOXG1P55316 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.87■□□□□ 0.13
FOXG1P55316 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
FOXG1P55316 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.87■□□□□ 0.13
FOXG1P55316 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.87■□□□□ 0.13
FOXG1P55316 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
FOXG1P55316 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.87■□□□□ 0.13
FOXG1P55316 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
FOXG1P55316 DRAXINP1-201ENST00000437611 948 ntBASIC15.86■□□□□ 0.13
FOXG1P55316 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
FOXG1P55316 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.86■□□□□ 0.13
FOXG1P55316 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.86■□□□□ 0.13
FOXG1P55316 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXG1P55316 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
FOXG1P55316 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXG1P55316 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.86■□□□□ 0.13
FOXG1P55316 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
FOXG1P55316 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.13
FOXG1P55316 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
FOXG1P55316 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
FOXG1P55316 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.85■□□□□ 0.13
FOXG1P55316 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 AP000867.3-201ENST00000524675 377 ntBASIC15.85■□□□□ 0.13
FOXG1P55316 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.85■□□□□ 0.13
FOXG1P55316 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FOXG1P55316 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
FOXG1P55316 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.85■□□□□ 0.13
FOXG1P55316 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.85■□□□□ 0.13
FOXG1P55316 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.84■□□□□ 0.13
FOXG1P55316 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FOXG1P55316 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
FOXG1P55316 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms