Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH12P55289 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH12P55289 AP003071.4-201ENST00000562276 1284 ntBASIC16.92■□□□□ 0.3
CDH12P55289 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDH12P55289 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH12P55289 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 PRORSD1P-202ENST00000563365 2154 ntBASIC16.91■□□□□ 0.3
CDH12P55289 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH12P55289 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 KRT8P50-201ENST00000562022 1438 ntBASIC16.91■□□□□ 0.3
CDH12P55289 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.91■□□□□ 0.3
CDH12P55289 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CDH12P55289 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH12P55289 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDH12P55289 AC034236.2-201ENST00000606662 1610 ntBASIC16.91■□□□□ 0.3
CDH12P55289 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH12P55289 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH12P55289 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH12P55289 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH12P55289 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH12P55289 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH12P55289 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH12P55289 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 AP005242.2-201ENST00000580065 1175 ntBASIC16.9■□□□□ 0.3
CDH12P55289 MIR4674-201ENST00000582457 87 ntBASIC16.9■□□□□ 0.3
CDH12P55289 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH12P55289 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH12P55289 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH12P55289 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH12P55289 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH12P55289 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH12P55289 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH12P55289 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH12P55289 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH12P55289 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH12P55289 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 AC106820.2-201ENST00000563775 3264 ntBASIC16.89■□□□□ 0.29
CDH12P55289 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH12P55289 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 AL645608.8-201ENST00000606034 2086 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms