Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS2P54868 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.85■□□□□ 0.93
HMGCS2P54868 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGCS2P54868 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGCS2P54868 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
HMGCS2P54868 Z83851.2-201ENST00000609564 659 ntBASIC20.85■□□□□ 0.93
HMGCS2P54868 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS2P54868 AP000867.4-201ENST00000641616 219 ntBASIC20.85■□□□□ 0.93
HMGCS2P54868 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS2P54868 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS2P54868 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS2P54868 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS2P54868 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS2P54868 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HMGCS2P54868 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCS2P54868 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS2P54868 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS2P54868 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 FAM197Y3-203ENST00000618346 717 ntBASIC20.84■□□□□ 0.93
HMGCS2P54868 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCS2P54868 AC107918.4-202ENST00000641623 219 ntBASIC20.84■□□□□ 0.93
HMGCS2P54868 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS2P54868 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 GMCL1P1-201ENST00000463439 1581 ntBASIC20.84■□□□□ 0.93
HMGCS2P54868 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS2P54868 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS2P54868 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCS2P54868 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGCS2P54868 AP002414.3-201ENST00000589352 1468 ntBASIC20.83■□□□□ 0.93
HMGCS2P54868 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS2P54868 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS2P54868 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HMGCS2P54868 AC005104.2-201ENST00000427818 678 ntBASIC20.83■□□□□ 0.93
HMGCS2P54868 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS2P54868 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS2P54868 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
HMGCS2P54868 AC105339.3-201ENST00000560043 636 ntBASIC20.83■□□□□ 0.93
HMGCS2P54868 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGCS2P54868 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.83■□□□□ 0.93
HMGCS2P54868 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HMGCS2P54868 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS2P54868 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.83■□□□□ 0.92
HMGCS2P54868 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMGCS2P54868 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HMGCS2P54868 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCS2P54868 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCS2P54868 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.82■□□□□ 0.92
HMGCS2P54868 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCS2P54868 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCS2P54868 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
HMGCS2P54868 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS2P54868 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGCS2P54868 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGCS2P54868 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.81■□□□□ 0.92
HMGCS2P54868 BX005266.1-201ENST00000473402 457 ntBASIC20.81■□□□□ 0.92
HMGCS2P54868 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.81■□□□□ 0.92
HMGCS2P54868 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGCS2P54868 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS2P54868 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS2P54868 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms