Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
LIMK2P53671 AL359075.1-203ENST00000462729 1002 ntBASIC18.29■□□□□ 0.52
LIMK2P53671 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.29■□□□□ 0.52
LIMK2P53671 NEK4P2-201ENST00000580004 1012 ntBASIC18.29■□□□□ 0.52
LIMK2P53671 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.29■□□□□ 0.52
LIMK2P53671 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
LIMK2P53671 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 AP000550.4-202ENST00000639755 178 ntBASIC18.29■□□□□ 0.52
LIMK2P53671 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.29■□□□□ 0.52
LIMK2P53671 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIMK2P53671 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.29■□□□□ 0.52
LIMK2P53671 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIMK2P53671 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LIMK2P53671 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
LIMK2P53671 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.28■□□□□ 0.52
LIMK2P53671 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.28■□□□□ 0.52
LIMK2P53671 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.28■□□□□ 0.52
LIMK2P53671 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.28■□□□□ 0.52
LIMK2P53671 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.28■□□□□ 0.52
LIMK2P53671 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.28■□□□□ 0.52
LIMK2P53671 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.28■□□□□ 0.52
LIMK2P53671 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
LIMK2P53671 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.28■□□□□ 0.52
LIMK2P53671 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIMK2P53671 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LIMK2P53671 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LIMK2P53671 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
LIMK2P53671 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.27■□□□□ 0.52
LIMK2P53671 KRT8P7-201ENST00000533003 1432 ntBASIC18.27■□□□□ 0.52
LIMK2P53671 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LIMK2P53671 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 AC009947.2-201ENST00000444014 672 ntBASIC18.27■□□□□ 0.52
LIMK2P53671 AL671277.2-201ENST00000458060 996 ntBASIC18.27■□□□□ 0.52
LIMK2P53671 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.27■□□□□ 0.52
LIMK2P53671 FAM86EP-206ENST00000510506 987 ntBASIC18.27■□□□□ 0.52
LIMK2P53671 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.27■□□□□ 0.52
LIMK2P53671 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.27■□□□□ 0.52
LIMK2P53671 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.27■□□□□ 0.52
LIMK2P53671 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.27■□□□□ 0.52
LIMK2P53671 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.27■□□□□ 0.52
LIMK2P53671 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
LIMK2P53671 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIMK2P53671 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.27■□□□□ 0.51
LIMK2P53671 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.27■□□□□ 0.51
LIMK2P53671 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.27■□□□□ 0.51
LIMK2P53671 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.27■□□□□ 0.51
LIMK2P53671 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LIMK2P53671 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LIMK2P53671 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms