Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RAB28P51157 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB28P51157 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB28P51157 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB28P51157 ATP5G2P1-201ENST00000433580 426 ntBASIC17.48■□□□□ 0.39
RAB28P51157 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.48■□□□□ 0.39
RAB28P51157 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB28P51157 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB28P51157 DUTP2-201ENST00000519164 463 ntBASIC17.48■□□□□ 0.39
RAB28P51157 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB28P51157 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB28P51157 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.48■□□□□ 0.39
RAB28P51157 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB28P51157 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB28P51157 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 REXO1L9P-201ENST00000604264 2108 ntBASIC17.48■□□□□ 0.39
RAB28P51157 AC135050.7-201ENST00000624508 2218 ntBASIC17.48■□□□□ 0.39
RAB28P51157 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB28P51157 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB28P51157 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB28P51157 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 RN7SL606P-201ENST00000472779 293 ntBASIC17.47■□□□□ 0.39
RAB28P51157 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB28P51157 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB28P51157 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 NPAP1P7-201ENST00000613027 823 ntBASIC17.47■□□□□ 0.39
RAB28P51157 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB28P51157 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
RAB28P51157 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RAB28P51157 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
RAB28P51157 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB28P51157 KRT18P1-202ENST00000452408 1331 ntBASIC17.47■□□□□ 0.39
RAB28P51157 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB28P51157 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
RAB28P51157 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RAB28P51157 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RAB28P51157 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RAB28P51157 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 AP002383.4-201ENST00000442518 975 ntBASIC17.46■□□□□ 0.39
RAB28P51157 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 AP002414.4-201ENST00000589764 1148 ntBASIC17.46■□□□□ 0.39
RAB28P51157 AC124864.1-201ENST00000623408 392 ntBASIC17.46■□□□□ 0.39
RAB28P51157 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB28P51157 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB28P51157 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB28P51157 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB28P51157 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB28P51157 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB28P51157 DRAXINP1-201ENST00000437611 948 ntBASIC17.45■□□□□ 0.38
RAB28P51157 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB28P51157 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB28P51157 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RAB28P51157 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
RAB28P51157 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms