Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.57■□□□□ 0.88
TM4SF4P48230 AF228730.6-201ENST00000641497 218 ntBASIC20.57■□□□□ 0.88
TM4SF4P48230 AC084121.3-201ENST00000641716 218 ntBASIC20.57■□□□□ 0.88
TM4SF4P48230 AC105233.6-201ENST00000642093 218 ntBASIC20.57■□□□□ 0.88
TM4SF4P48230 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.57■□□□□ 0.88
TM4SF4P48230 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TM4SF4P48230 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.56■□□□□ 0.88
TM4SF4P48230 BCAR1-209ENST00000546196 1340 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 AC063926.2-201ENST00000623766 1308 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.56■□□□□ 0.88
TM4SF4P48230 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TM4SF4P48230 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.56■□□□□ 0.88
TM4SF4P48230 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF4P48230 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF4P48230 AC004461.1-201ENST00000412461 403 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF4P48230 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF4P48230 AC074386.1-202ENST00000463561 864 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.56■□□□□ 0.88
TM4SF4P48230 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.56■□□□□ 0.88
TM4SF4P48230 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.56■□□□□ 0.88
TM4SF4P48230 Z92544.3-201ENST00000624747 417 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 AC105339.1-204ENST00000636249 355 ntBASIC20.56■□□□□ 0.88
TM4SF4P48230 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TM4SF4P48230 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF4P48230 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
TM4SF4P48230 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.56■□□□□ 0.88
TM4SF4P48230 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TM4SF4P48230 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.56■□□□□ 0.88
TM4SF4P48230 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.55■□□□□ 0.88
TM4SF4P48230 NCF1C-201ENST00000438382 1427 ntBASIC20.55■□□□□ 0.88
TM4SF4P48230 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF4P48230 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TM4SF4P48230 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.55■□□□□ 0.88
TM4SF4P48230 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF4P48230 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF4P48230 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF4P48230 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF4P48230 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.55■□□□□ 0.88
TM4SF4P48230 AC010507.1-201ENST00000633895 436 ntBASIC20.55■□□□□ 0.88
TM4SF4P48230 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TM4SF4P48230 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.55■□□□□ 0.88
TM4SF4P48230 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM4SF4P48230 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TM4SF4P48230 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TM4SF4P48230 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.54■□□□□ 0.88
TM4SF4P48230 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TM4SF4P48230 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TM4SF4P48230 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.54■□□□□ 0.88
TM4SF4P48230 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.54■□□□□ 0.88
TM4SF4P48230 AC109322.1-201ENST00000524499 1264 ntBASIC20.54■□□□□ 0.88
TM4SF4P48230 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.54■□□□□ 0.88
TM4SF4P48230 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 AL035252.4-201ENST00000624174 288 ntBASIC20.54■□□□□ 0.88
TM4SF4P48230 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TM4SF4P48230 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TM4SF4P48230 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.53■□□□□ 0.88
TM4SF4P48230 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TM4SF4P48230 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 MRPL20P1-201ENST00000400819 433 ntBASIC20.53■□□□□ 0.88
TM4SF4P48230 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.53■□□□□ 0.88
TM4SF4P48230 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.53■□□□□ 0.88
TM4SF4P48230 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.53■□□□□ 0.88
TM4SF4P48230 AJ011932.1-201ENST00000621707 465 ntBASIC20.53■□□□□ 0.88
TM4SF4P48230 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TM4SF4P48230 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TM4SF4P48230 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms