Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SLC6A12P48065 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC6A12P48065 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A12P48065 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A12P48065 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A12P48065 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A12P48065 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC6A12P48065 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC6A12P48065 KRT18P48-201ENST00000434763 852 ntBASIC17.49■□□□□ 0.39
SLC6A12P48065 AL359075.1-203ENST00000462729 1002 ntBASIC17.49■□□□□ 0.39
SLC6A12P48065 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC6A12P48065 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC6A12P48065 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC6A12P48065 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.49■□□□□ 0.39
SLC6A12P48065 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A12P48065 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 AC100803.2-201ENST00000562459 1963 ntBASIC17.49■□□□□ 0.39
SLC6A12P48065 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A12P48065 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A12P48065 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A12P48065 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A12P48065 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A12P48065 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SLC6A12P48065 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC6A12P48065 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 MIR662-201ENST00000384847 95 ntBASIC17.48■□□□□ 0.39
SLC6A12P48065 AC112907.2-201ENST00000448639 330 ntBASIC17.48■□□□□ 0.39
SLC6A12P48065 AC063952.2-201ENST00000498792 1227 ntBASIC17.48■□□□□ 0.39
SLC6A12P48065 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 RN7SL850P-201ENST00000579959 291 ntBASIC17.48■□□□□ 0.39
SLC6A12P48065 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SLC6A12P48065 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A12P48065 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A12P48065 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A12P48065 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 KRT18P65-201ENST00000439811 1286 ntBASIC17.47■□□□□ 0.39
SLC6A12P48065 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A12P48065 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A12P48065 AC004263.2-201ENST00000617183 678 ntBASIC17.47■□□□□ 0.39
SLC6A12P48065 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A12P48065 AC012317.2-201ENST00000623305 2251 ntBASIC17.47■□□□□ 0.39
SLC6A12P48065 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A12P48065 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A12P48065 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A12P48065 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC6A12P48065 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A12P48065 AC022898.2-201ENST00000616822 1312 ntBASIC17.47■□□□□ 0.39
SLC6A12P48065 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms