Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP8P40818 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.76■□□□□ 0.75
USP8P40818 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
USP8P40818 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.75■□□□□ 0.75
USP8P40818 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 HMGA1P5-201ENST00000412453 271 ntBASIC19.75■□□□□ 0.75
USP8P40818 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.75■□□□□ 0.75
USP8P40818 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
USP8P40818 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP8P40818 KRT18P22-201ENST00000402024 1347 ntBASIC19.75■□□□□ 0.75
USP8P40818 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.75■□□□□ 0.75
USP8P40818 AC012313.1-201ENST00000593393 3059 ntBASIC19.74■□□□□ 0.75
USP8P40818 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.74■□□□□ 0.75
USP8P40818 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.74■□□□□ 0.75
USP8P40818 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.74■□□□□ 0.75
USP8P40818 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.74■□□□□ 0.75
USP8P40818 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 KRT8P7-201ENST00000533003 1432 ntBASIC19.74■□□□□ 0.75
USP8P40818 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP8P40818 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 GMCL1P1-201ENST00000463439 1581 ntBASIC19.74■□□□□ 0.75
USP8P40818 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP8P40818 AC139713.2-201ENST00000641328 2723 ntBASIC19.74■□□□□ 0.75
USP8P40818 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USP8P40818 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
USP8P40818 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
USP8P40818 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.73■□□□□ 0.75
USP8P40818 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP8P40818 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
USP8P40818 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
USP8P40818 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 AC024243.1-201ENST00000609234 778 ntBASIC19.73■□□□□ 0.75
USP8P40818 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.73■□□□□ 0.75
USP8P40818 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 AC093677.2-201ENST00000600169 1863 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms