Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN6P29350 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN6P29350 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN6P29350 TMPOP1-202ENST00000424642 1267 ntBASIC17.21■□□□□ 0.35
PTPN6P29350 KRT18P23-201ENST00000435622 1283 ntBASIC17.21■□□□□ 0.35
PTPN6P29350 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN6P29350 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN6P29350 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
PTPN6P29350 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN6P29350 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PTPN6P29350 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN6P29350 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN6P29350 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTPN6P29350 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN6P29350 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN6P29350 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.34
PTPN6P29350 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN6P29350 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN6P29350 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PTPN6P29350 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN6P29350 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PTPN6P29350 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PTPN6P29350 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN6P29350 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN6P29350 ATP5G1P1-201ENST00000448724 379 ntBASIC17.2■□□□□ 0.34
PTPN6P29350 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN6P29350 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN6P29350 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN6P29350 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 AC139713.2-201ENST00000641328 2723 ntBASIC17.2■□□□□ 0.34
PTPN6P29350 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN6P29350 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN6P29350 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTPN6P29350 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.19■□□□□ 0.34
PTPN6P29350 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTPN6P29350 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTPN6P29350 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN6P29350 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTPN6P29350 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTPN6P29350 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTPN6P29350 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN6P29350 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN6P29350 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN6P29350 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN6P29350 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN6P29350 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN6P29350 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN6P29350 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.18■□□□□ 0.34
PTPN6P29350 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN6P29350 AL138966.2-201ENST00000621997 464 ntBASIC17.18■□□□□ 0.34
PTPN6P29350 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN6P29350 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN6P29350 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms