Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.25■□□□□ 0.35
PRPH2P23942 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRPH2P23942 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.25■□□□□ 0.35
PRPH2P23942 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRPH2P23942 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPH2P23942 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
PRPH2P23942 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRPH2P23942 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPH2P23942 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.24■□□□□ 0.35
PRPH2P23942 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
PRPH2P23942 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
PRPH2P23942 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPH2P23942 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PRPH2P23942 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 SIRPAP1-201ENST00000448467 1770 ntBASIC17.24■□□□□ 0.35
PRPH2P23942 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRPH2P23942 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPH2P23942 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.23■□□□□ 0.35
PRPH2P23942 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 AL596275.1-201ENST00000423464 877 ntBASIC17.23■□□□□ 0.35
PRPH2P23942 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 AC034232.1-201ENST00000506026 1064 ntBASIC17.23■□□□□ 0.35
PRPH2P23942 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PRPH2P23942 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PRPH2P23942 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPH2P23942 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPH2P23942 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
PRPH2P23942 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRPH2P23942 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
PRPH2P23942 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.22■□□□□ 0.35
PRPH2P23942 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.22■□□□□ 0.35
PRPH2P23942 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.22■□□□□ 0.35
PRPH2P23942 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPH2P23942 GCSHP2-201ENST00000560971 527 ntBASIC17.22■□□□□ 0.35
PRPH2P23942 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.22■□□□□ 0.35
PRPH2P23942 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRPH2P23942 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPH2P23942 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.22■□□□□ 0.35
PRPH2P23942 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms