Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
XPAP23025 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
XPAP23025 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.27■□□□□ 0.52
XPAP23025 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
XPAP23025 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.27■□□□□ 0.52
XPAP23025 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.27■□□□□ 0.52
XPAP23025 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.27■□□□□ 0.52
XPAP23025 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 AC113404.2-201ENST00000507884 177 ntBASIC18.27■□□□□ 0.52
XPAP23025 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
XPAP23025 AP002414.4-201ENST00000589764 1148 ntBASIC18.27■□□□□ 0.52
XPAP23025 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
XPAP23025 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 AC073592.3-201ENST00000625118 1834 ntBASIC18.27■□□□□ 0.52
XPAP23025 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
XPAP23025 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
XPAP23025 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
XPAP23025 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
XPAP23025 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
XPAP23025 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
XPAP23025 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.27■□□□□ 0.51
XPAP23025 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
XPAP23025 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
XPAP23025 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
XPAP23025 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.26■□□□□ 0.51
XPAP23025 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 TSPY12P-201ENST00000421279 868 ntBASIC18.26■□□□□ 0.51
XPAP23025 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.26■□□□□ 0.51
XPAP23025 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.26■□□□□ 0.51
XPAP23025 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.26■□□□□ 0.51
XPAP23025 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.26■□□□□ 0.51
XPAP23025 AC124864.1-201ENST00000623408 392 ntBASIC18.26■□□□□ 0.51
XPAP23025 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
XPAP23025 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
XPAP23025 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
XPAP23025 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
XPAP23025 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.25■□□□□ 0.51
XPAP23025 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 LINC01126-201ENST00000623515 1646 ntBASIC18.25■□□□□ 0.51
XPAP23025 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
XPAP23025 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
XPAP23025 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.25■□□□□ 0.51
XPAP23025 VENTXP7-201ENST00000475503 772 ntBASIC18.25■□□□□ 0.51
XPAP23025 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
XPAP23025 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.25■□□□□ 0.51
XPAP23025 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.25■□□□□ 0.51
XPAP23025 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.25■□□□□ 0.51
XPAP23025 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.25■□□□□ 0.51
XPAP23025 AC004408.2-201ENST00000623613 2777 ntBASIC18.25■□□□□ 0.51
XPAP23025 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms