Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDH3P22223 AC009113.1-201ENST00000570267 2443 ntBASIC17.77■□□□□ 0.44
CDH3P22223 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH3P22223 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDH3P22223 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH3P22223 SPDYE13P-201ENST00000445314 798 ntBASIC17.77■□□□□ 0.44
CDH3P22223 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.77■□□□□ 0.44
CDH3P22223 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH3P22223 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDH3P22223 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH3P22223 KRT8P50-201ENST00000562022 1438 ntBASIC17.77■□□□□ 0.44
CDH3P22223 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.77■□□□□ 0.44
CDH3P22223 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDH3P22223 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CDH3P22223 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.77■□□□□ 0.43
CDH3P22223 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH3P22223 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.77■□□□□ 0.43
CDH3P22223 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH3P22223 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.76■□□□□ 0.43
CDH3P22223 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CDH3P22223 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH3P22223 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CDH3P22223 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH3P22223 HLA-F-220ENST00000434407 884 ntBASIC17.76■□□□□ 0.43
CDH3P22223 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.76■□□□□ 0.43
CDH3P22223 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH3P22223 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH3P22223 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH3P22223 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.76■□□□□ 0.43
CDH3P22223 AC093458.2-201ENST00000623150 629 ntBASIC17.76■□□□□ 0.43
CDH3P22223 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH3P22223 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH3P22223 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH3P22223 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH3P22223 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CDH3P22223 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CDH3P22223 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH3P22223 KRT18P41-201ENST00000518924 1277 ntBASIC17.75■□□□□ 0.43
CDH3P22223 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH3P22223 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH3P22223 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH3P22223 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH3P22223 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH3P22223 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms