Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC2P18074 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ERCC2P18074 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC2P18074 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ERCC2P18074 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC2P18074 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ERCC2P18074 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC2P18074 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.65■□□□□ 0.58
ERCC2P18074 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 AP003733.1-201ENST00000491725 852 ntBASIC18.65■□□□□ 0.58
ERCC2P18074 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.65■□□□□ 0.58
ERCC2P18074 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC2P18074 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC2P18074 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC2P18074 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC2P18074 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC2P18074 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC2P18074 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC2P18074 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC2P18074 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
ERCC2P18074 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.64■□□□□ 0.58
ERCC2P18074 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC2P18074 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC2P18074 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC2P18074 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.64■□□□□ 0.57
ERCC2P18074 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 AC004263.2-201ENST00000617183 678 ntBASIC18.64■□□□□ 0.57
ERCC2P18074 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.64■□□□□ 0.57
ERCC2P18074 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC2P18074 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ERCC2P18074 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC2P18074 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC2P18074 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC2P18074 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC2P18074 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
ERCC2P18074 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC2P18074 AL031133.1-201ENST00000406807 723 ntBASIC18.63■□□□□ 0.57
ERCC2P18074 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ERCC2P18074 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC2P18074 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC2P18074 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC2P18074 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.63■□□□□ 0.57
ERCC2P18074 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC2P18074 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC2P18074 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms