Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.06■■□□□ 1.12
COL11A2P13942 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.06■■□□□ 1.12
COL11A2P13942 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
COL11A2P13942 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
COL11A2P13942 AL035633.1-201ENST00000406139 838 ntBASIC22.05■■□□□ 1.12
COL11A2P13942 CRYGEP-201ENST00000412192 528 ntBASIC22.05■■□□□ 1.12
COL11A2P13942 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
COL11A2P13942 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL11A2P13942 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.04■■□□□ 1.12
COL11A2P13942 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.04■■□□□ 1.12
COL11A2P13942 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.04■■□□□ 1.12
COL11A2P13942 MKNK2P1-201ENST00000437526 628 ntBASIC22.04■■□□□ 1.12
COL11A2P13942 C20orf181-201ENST00000623918 480 ntBASIC22.04■■□□□ 1.12
COL11A2P13942 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.04■■□□□ 1.12
COL11A2P13942 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
COL11A2P13942 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.04■■□□□ 1.12
COL11A2P13942 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL11A2P13942 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL11A2P13942 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
COL11A2P13942 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.03■■□□□ 1.12
COL11A2P13942 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.03■■□□□ 1.12
COL11A2P13942 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL11A2P13942 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL11A2P13942 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
COL11A2P13942 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.03■■□□□ 1.12
COL11A2P13942 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.03■■□□□ 1.12
COL11A2P13942 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.03■■□□□ 1.12
COL11A2P13942 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.03■■□□□ 1.12
COL11A2P13942 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.03■■□□□ 1.12
COL11A2P13942 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.03■■□□□ 1.12
COL11A2P13942 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.03■■□□□ 1.12
COL11A2P13942 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL11A2P13942 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 AL353593.2-201ENST00000602529 1483 ntBASIC22.02■■□□□ 1.12
COL11A2P13942 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.02■■□□□ 1.12
COL11A2P13942 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.02■■□□□ 1.12
COL11A2P13942 TSEN15P1-201ENST00000423257 515 ntBASIC22.02■■□□□ 1.12
COL11A2P13942 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COL11A2P13942 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.02■■□□□ 1.12
COL11A2P13942 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 AC010654.1-201ENST00000615722 808 ntBASIC22.02■■□□□ 1.12
COL11A2P13942 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL11A2P13942 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
COL11A2P13942 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.01■■□□□ 1.11
COL11A2P13942 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.01■■□□□ 1.11
COL11A2P13942 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COL11A2P13942 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
COL11A2P13942 PDPK2P-202ENST00000562415 1191 ntBASIC22.01■■□□□ 1.11
COL11A2P13942 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 AC004706.3-202ENST00000621574 984 ntBASIC22.01■■□□□ 1.11
COL11A2P13942 AC073592.5-201ENST00000624854 528 ntBASIC22.01■■□□□ 1.11
COL11A2P13942 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 AFG3L1P-217ENST00000557444 2447 ntBASIC22.01■■□□□ 1.11
COL11A2P13942 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 AC093010.1-201ENST00000473625 1624 ntBASIC22.01■■□□□ 1.11
COL11A2P13942 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms