Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR3687-1-201ENST00000614492 61 ntBASIC31.54■■■□□ 2.64
TOP2AP11388 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC31.54■■■□□ 2.64
TOP2AP11388 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC31.54■■■□□ 2.64
TOP2AP11388 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC31.54■■■□□ 2.64
TOP2AP11388 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
TOP2AP11388 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TOP2AP11388 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOP2AP11388 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TOP2AP11388 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC31.53■■■□□ 2.64
TOP2AP11388 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC31.53■■■□□ 2.64
TOP2AP11388 AC073592.5-201ENST00000624854 528 ntBASIC31.53■■■□□ 2.64
TOP2AP11388 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC31.53■■■□□ 2.64
TOP2AP11388 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC31.52■■■□□ 2.64
TOP2AP11388 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC31.52■■■□□ 2.64
TOP2AP11388 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
TOP2AP11388 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC31.52■■■□□ 2.64
TOP2AP11388 AL589182.2-201ENST00000619332 1049 ntBASIC31.52■■■□□ 2.64
TOP2AP11388 AC004706.3-202ENST00000621574 984 ntBASIC31.52■■■□□ 2.64
TOP2AP11388 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 AC004817.3-201ENST00000602957 2129 ntBASIC31.52■■■□□ 2.64
TOP2AP11388 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC31.52■■■□□ 2.64
TOP2AP11388 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC31.52■■■□□ 2.64
TOP2AP11388 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
TOP2AP11388 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOP2AP11388 RPS8P6-201ENST00000426177 609 ntBASIC31.51■■■□□ 2.63
TOP2AP11388 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC31.51■■■□□ 2.63
TOP2AP11388 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC31.51■■■□□ 2.63
TOP2AP11388 AC005593.1-201ENST00000624894 515 ntBASIC31.51■■■□□ 2.63
TOP2AP11388 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC31.51■■■□□ 2.63
TOP2AP11388 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOP2AP11388 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOP2AP11388 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOP2AP11388 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TOP2AP11388 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
TOP2AP11388 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TOP2AP11388 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC31.5■■■□□ 2.63
TOP2AP11388 KLF4P1-201ENST00000412782 1185 ntBASIC31.5■■■□□ 2.63
TOP2AP11388 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC31.5■■■□□ 2.63
TOP2AP11388 ARTN-206ENST00000472435 402 ntTSL 3 BASIC31.5■■■□□ 2.63
TOP2AP11388 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC31.5■■■□□ 2.63
TOP2AP11388 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC31.5■■■□□ 2.63
TOP2AP11388 MTDHP5-201ENST00000598980 586 ntBASIC31.5■■■□□ 2.63
TOP2AP11388 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
TOP2AP11388 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
TOP2AP11388 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC31.5■■■□□ 2.63
TOP2AP11388 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TOP2AP11388 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TOP2AP11388 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TOP2AP11388 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
TOP2AP11388 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
TOP2AP11388 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOP2AP11388 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC31.49■■■□□ 2.63
TOP2AP11388 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC31.49■■■□□ 2.63
TOP2AP11388 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOP2AP11388 TBC1D3P5-201ENST00000579401 1545 ntBASIC31.49■■■□□ 2.63
TOP2AP11388 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TOP2AP11388 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC31.49■■■□□ 2.63
TOP2AP11388 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC31.49■■■□□ 2.63
TOP2AP11388 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TOP2AP11388 NCF1C-201ENST00000438382 1427 ntBASIC31.49■■■□□ 2.63
TOP2AP11388 AC006504.4-201ENST00000592118 1568 ntBASIC31.49■■■□□ 2.63
TOP2AP11388 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC31.49■■■□□ 2.63
TOP2AP11388 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC31.48■■■□□ 2.63
TOP2AP11388 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC31.48■■■□□ 2.63
TOP2AP11388 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
TOP2AP11388 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.48■■■□□ 2.63
TOP2AP11388 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC31.48■■■□□ 2.63
TOP2AP11388 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC31.48■■■□□ 2.63
TOP2AP11388 RIN3-211ENST00000557762 517 ntTSL 3 BASIC31.48■■■□□ 2.63
TOP2AP11388 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
TOP2AP11388 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC31.48■■■□□ 2.63
TOP2AP11388 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 AC132938.5-201ENST00000624980 1813 ntBASIC31.47■■■□□ 2.63
TOP2AP11388 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC31.47■■■□□ 2.63
TOP2AP11388 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
TOP2AP11388 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms