Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHRNB1P11230 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHRNB1P11230 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNB1P11230 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNB1P11230 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNB1P11230 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNB1P11230 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 RPSAP43-201ENST00000402237 625 ntBASIC18.34■□□□□ 0.53
CHRNB1P11230 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNB1P11230 RNA5SP415-201ENST00000517246 115 ntBASIC18.34■□□□□ 0.53
CHRNB1P11230 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNB1P11230 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.34■□□□□ 0.53
CHRNB1P11230 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 AC025062.2-201ENST00000605477 670 ntBASIC18.34■□□□□ 0.53
CHRNB1P11230 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNB1P11230 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNB1P11230 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNB1P11230 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNB1P11230 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNB1P11230 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNB1P11230 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNB1P11230 KRT18P3-201ENST00000451602 1288 ntBASIC18.33■□□□□ 0.52
CHRNB1P11230 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNB1P11230 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNB1P11230 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNB1P11230 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHRNB1P11230 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB1P11230 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB1P11230 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 GPX1P2-201ENST00000429271 606 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB1P11230 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNB1P11230 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB1P11230 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNB1P11230 AC010327.4-202ENST00000591484 748 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNB1P11230 AC008735.5-201ENST00000623544 497 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 AC083906.6-201ENST00000641366 219 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 MYLKP1-201ENST00000509077 1580 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNB1P11230 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNB1P11230 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNB1P11230 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 LINC00602-201ENST00000629776 2065 ntBASIC18.32■□□□□ 0.52
CHRNB1P11230 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNB1P11230 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNB1P11230 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHRNB1P11230 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNB1P11230 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNB1P11230 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB1P11230 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.31■□□□□ 0.52
CHRNB1P11230 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHRNB1P11230 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNB1P11230 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB1P11230 AL139288.1-201ENST00000623748 933 ntBASIC18.31■□□□□ 0.52
CHRNB1P11230 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNB1P11230 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms