Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CD28P10747 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CD28P10747 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.17□□□□□ -0.14
CD28P10747 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
CD28P10747 AP000347.1-202ENST00000435868 847 ntBASIC14.17□□□□□ -0.14
CD28P10747 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 AC079776.4-201ENST00000511039 504 ntBASIC14.17□□□□□ -0.14
CD28P10747 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 AL121912.1-201ENST00000603683 238 ntBASIC14.17□□□□□ -0.14
CD28P10747 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.17□□□□□ -0.14
CD28P10747 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.17□□□□□ -0.14
CD28P10747 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.17□□□□□ -0.14
CD28P10747 MYLKP1-201ENST00000509077 1580 ntBASIC14.17□□□□□ -0.14
CD28P10747 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD28P10747 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.17□□□□□ -0.14
CD28P10747 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
CD28P10747 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 AKR1C7P-201ENST00000305623 895 ntBASIC14.16□□□□□ -0.14
CD28P10747 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CD28P10747 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CD28P10747 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.16□□□□□ -0.14
CD28P10747 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.16□□□□□ -0.14
CD28P10747 AP002469.2-201ENST00000531724 424 ntBASIC14.16□□□□□ -0.14
CD28P10747 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.16□□□□□ -0.14
CD28P10747 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.16□□□□□ -0.14
CD28P10747 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD28P10747 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.16□□□□□ -0.14
CD28P10747 AC112777.1-201ENST00000540175 1423 ntBASIC14.15□□□□□ -0.14
CD28P10747 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD28P10747 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.15□□□□□ -0.14
CD28P10747 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CD28P10747 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.15□□□□□ -0.14
CD28P10747 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD28P10747 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms