Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 AC005082.1-201ENST00000413042 2259 ntBASIC14.38□□□□□ -0.11
PF4V1P10720 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PF4V1P10720 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
PF4V1P10720 AC009102.3-201ENST00000623118 1491 ntBASIC14.38□□□□□ -0.11
PF4V1P10720 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.37□□□□□ -0.11
PF4V1P10720 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PF4V1P10720 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.37□□□□□ -0.11
PF4V1P10720 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PF4V1P10720 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.37□□□□□ -0.11
PF4V1P10720 SPDYE13P-201ENST00000445314 798 ntBASIC14.37□□□□□ -0.11
PF4V1P10720 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.37□□□□□ -0.11
PF4V1P10720 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.37□□□□□ -0.11
PF4V1P10720 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.37□□□□□ -0.11
PF4V1P10720 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.37□□□□□ -0.11
PF4V1P10720 AC012313.10-201ENST00000623509 926 ntBASIC14.37□□□□□ -0.11
PF4V1P10720 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
PF4V1P10720 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PF4V1P10720 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PF4V1P10720 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PF4V1P10720 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
PF4V1P10720 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.36□□□□□ -0.11
PF4V1P10720 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.36□□□□□ -0.11
PF4V1P10720 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.36□□□□□ -0.11
PF4V1P10720 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PF4V1P10720 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PF4V1P10720 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PF4V1P10720 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.36□□□□□ -0.11
PF4V1P10720 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.36□□□□□ -0.11
PF4V1P10720 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PF4V1P10720 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 WIZP1-201ENST00000531444 2299 ntBASIC14.35□□□□□ -0.11
PF4V1P10720 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms